Acknowledgement of Contributions

Policy on recognition of the work of data providers

You may use the data from the Canadian VirusSeq Data Portal to author results obtained from your analyses of relevant data, provided that your published results acknowledge the contribution of VirusSeq and its partners. We suggest using the following acknowledgement sentence: "The results here are in whole, or in part based upon data hosted at the Canadian VirusSeq Data Portal: https://virusseq-dataportal.ca/. We wish to acknowledge the Canadian Public Health Laboratory Network (CPHLN), Genome Canada and the CanCOGeN VirusSeq Consortium for their contribution to the Portal, see supplementary file for detailed information" (supplementary file must be submitted as an addendum to your publication). You may redistribute the data available on the Canadian VirusSeq Data Portal under the same terms and conditions as specified in this policy. You should not impose any additional or different terms or conditions on, or apply any effective technological measures to the data, if doing so restricts the use of the data by others.

Please note that the data that is being shared is the work of many individuals and should be treated as unpublished data. If you wish to publish research using these data, you are encouraged to contact us at info@virusseq-dataportal.ca before analyzing the data to ensure that those who have generated the data may be involved in its analysis. You are responsible for making the best efforts to collaborate with representatives of the data providers responsible for obtaining the specimens and to involve them in your analyses and research. The metadata available on the Canadian VirusSeq Data Portal comprises a subset of the Canadian COVID-19 related datasets. You may potentially have access to more data through formal collaborations with the CPHLN and CanCOGeN VirusSeq members. You are encouraged to contact us at info@virusseq-dataportal.ca to obtain additional information for this purpose.

Canadian Public Health Laboratory Network (CPHLN) members and staffs having contributed data to the portal

Alberta

Genomes with prefix ABPHL
Buss, E, Croxen M, Deo A, Dieu P, Gill K, Ferrato C, Khan F, Koleva P, Li V, Lloyd C, Lynch T, Ma R, Murphy S, Pabbaraju K, Shokoples S, Tipples G, Thayer J, Whitehouse M, Wong A, Yu C, Zelyas N

Genomes in collaboration with UC (prefix AB-NNNNNN)
Gordon P, Lam LG, Pabbaraju K, Wong A, Ma R, Li V, Melin A, Tipples G, Berenger B, Zelyas N, Kellner J, Bernier F, Chui L, Croxen M

British Columbia

BCCDC Public Health Laboratory
Prystajecky Natalie, Linda Hoang, John R. Tyson, Dan Fornika, Shannon Russell, Kim MacDonald, Kimia Kamelian, Ana Pacagnella, Corrinne Ng, Loretta Janz, Richard Harrigan, Robert Azana, Mel Krajden

Manitoba

Cadham Provincial Laboratory collected specimens sequenced at the National Microbiology Lab (NML)
Paul Van Caeseele, Jared Bullard, David Alexander, Kerry Dust.

NML
Anna Majer, Shari Tyson, Grace Seo, Philip Mabon, Elsie Grudeski, Rhiannon Huzarewich, Russell Mandes, Anneliese Landgraff, Jennifer Tanner, Natalie Knox, Morag Graham, Gary Van Domselaar, Nathalie Bastien, Yan Li, Timothy Booth, Darian Hole, Madison Chapel, Kirsten Biggar

Cadham Provincial Laboratory sequenced specimens
David Alexander, Lori Johnson, Janna Holowick, Joanne Sanders, Adam Hedley, Kerry Dust

Dynacare sequenced specimens:
Hilary Racher, Melissa Desaulnier, Tintu Abraham, Hongbin Li (Impact Genetics, Brampton Ontario)

New Brunswick

Centre Hospitalier Universitaire Georges L. Dumont; National Microbiology Laboratory
Richard Garceau, Guillaume Desnoyers, Nicolas Crapoulet, Pierre Lyons, Woodson Shaw and Simi Chacko, Anna Majer, Shari Tyson, Grace Seo, Philip Mabon, Elsie Grudeski, Rhiannon Huzarewich, Russell Mandes, Anneliese Landgraff, Jennifer Tanner, Natalie Knox, Morag Graham, Gary Van Domselaar, Nathalie Bastien, Yan Li, Timothy Booth, Darian Hole, Madison Chapel, Kirsten Biggar.

Newfoundland and Labrador

Newfoundland and Labrador Health Services
(previously known as "Newfoundland and Labrador - Eastern Health")
Robert Needle, Yang Yu, Laura Gilbert, George Zahariadis, Chris Corkum, Anna Majer, Shari Tyson, Grace Seo, Philip Mabon, Elsie Grudeski, Rhiannon Huzarewich, Russell Mandes, Anneliese Landgraff, Jennifer Tanner, Natalie Knox, Morag Graham, Gary Van Domselaar, Nathalie Bastien, Yan Li, Timothy Booth, Darian Hole, Madison Chapel, Kirsten Biggar, Kerri Smith, Phillip Andrews, Matthew Gilmour.

Nova Scotia

QEII Health Sciences Centre*; National Microbiology Laboratory
Todd Hatchette, Jason LeBlanc, Janice Pettipas, Dan Gaston, Greg McCracken, Nathalie Bastien, Yan Li, Timothy Booth, Darian Hole, Madison Chapel, Kirsten Biggar, Anna Majer, Shari Tyson, Grace Seo, Philip Mabon, Elsie Grudeski, Rhiannon Huzarewich, Russell Mandes, Anneliese Landgraff, Jennifer Tanner, Natalie Knox, Morag Graham, Gary Van Domselaar.
(*data tagged post September 14th should include Allana Loder)

Ontario

Public Health Ontario Laboratory
Vanessa G Allen, Philip Banh, Yao Chen, , Alireza Eshaghi, Nahuel Fittipaldi, Christine Frantz, Jonathan B Gubbay, Jennifer L Guthrie, Esha Joshi, Aimin Li, Michael C.Y. Li, Dean Maxwell, Sandeep Nagra, Samir N. Patel, Karthikeyan Sivaraman, Ashleigh Sullivan, Sarah Teatero, Andre Villegas, Matthew Watson, Sandra Zittermann

Ontario Institute for Cancer Research
Jared T. Simpson, Richard de Borja, Paul Krzyzanowski, Bernard Lam, Lawrence Heisler, Michael Laszloffy, Yogi Sundaravadanam, Ilinca Lungu, Lubaina Kothari, Cassandra Bergwerff, Jeremy Johns, Felicia Vincelli, Philip Zuzarte

McMaster University
Hooman Derakhshani, Sheridan J.C. Baker, Emily M. Panousis, Ahmed N. Draia, Jalees A. Nasir, Michael G. Surette, Andrew G. McArthur

Québec

Laboratoire de Santé Publique du Québec, McGill Génome Sciences Centre; CoVSeq Consortium
Sandrine Moreira, Jiannis Ragoussis, Guillaume Bourque, Jesse Shapiro, Éric Fournier, Réjean Dion, Hugues Charest, Aurélie Guilbault, Benjamin Delisle, Sarah Reiling, Anne-Marie Roy, Shu-Huang Chen, Corinne Darmond, Sally Lee, Brent Brookes, Pierre Lepage, Jannick St-Cyr, Patrick Willet, Mathieu Bourgey, David Bujold, Hector Galvez, Paul Stretenowich, Pierre-Olivier Quirion, Romain Grégoire, Carmen Lia Murall, Julie Hussin, Raphaël Poujol, Jean-Christophe Grenier, Fatima Mostefai, Sylvie Laboissières, Alexandre Montpetit, Mark Lathrop, Michel Roger

Saskatchewan

Roy Romanow Provincial Laboratory
Ryan McDonald, Keith MacKenzie, Meredith Faires, Kara Loos, Stefani Kary, Rachel DePaulo, Laura Klassen, Alanna Senecal, Amanda Lang, Jessica Minion, Roy Romanow Provincial Laboratory - Molecular Diagnostics.

National Microbiology Laboratory
Anna Majer, Shari Tyson, Grace Seo, Philip Mabon, Elsie Grudeski, Rhiannon Huzarewich, Russell Mandes, Anneliese Landgraff, Jennifer Tanner, Natalie Knox, Morag Graham, Gary Van Domselaar, Nathalie Bastien, Yan Li, Timothy Booth, Darian Hole, Madison Chapel, Kristen Biggar, Emily Haidl, Chanchal Yadav, Jeff Tuff, Connor Chato, Katherine Eaton, and Adrian Zetner.

Academic, Health Network and Research Institutions staffs having contributed data to the portal

Unity Health Toronto
Ramzi Fattouh, Larissa M. Matukas, Yan Chen, Mark Downing, Trina Otterman, Karel Boissinot, Le Luu

University Health Network/Mount Sinai Hospital Department of Microbiology
Marie-Ming Aynaud, Javier Hernandez, Seda Barutcu, Kin Chan, Jessica Bourke, Marc Mazzulli, Tony Mazzulli, Laurence Pelletier, Jeff Wrana, Aimee Paterson, Angel Liu, Allison McGeer

Kingston Health Sciences Centre and Queen’s University
Prameet M. Sheth, Calvin Sjaarda, Robert Colautti, Katya Douchant

University of British Columbia
John R. Tyson, Gabrielle Jayme, Karen Jones, Terrance P. Snutch

Toronto Invasive Bacterial Diseases Network; Sunnybrook Health Sciences
Allison McGeer, Patryk Aftanas, Angel Li, Kuganya Nirmalarajah, Emily Panousis, Ahmed Draia, Jalees Nasir, David Richardson, Michael Surette, Samira Mubareka, Andrew G. McArthur

Eastern Ontario Regional Laboratory Association
Leanne Mortimer, Hooman Derakhshani, Emily Panousis, Ahmed Draia, Jalees Nasir, Robert Slinger, Andrew G. McArthur

CanCOGeN VirusSeq committees and working groups’ members

CanCOGeN VirusSeq Implementation Committee
Terrance Snutch, Fiona Brinkman, Marceline Côté, William Hsiao, Yann Joly, Sharmistha Mishra, Sandrine Moreira, Samira Mubareka, Jared Simpson, Megan Smallwood, Gary Van Domselaar

CanCOGeN Capacity Building Working Group
Gary Van Domselaar, Matthew Croxen, Natalie Knox, Celine Nadon, Jennifer Tanner

CanCOGeN Data Analytics Working Group
Gary Van Domselaar, Fiona Brinkman, Zohaib Anwar, Robert Beiko, Matieu Bourgey, Guillaume Bourque, Richard de Borja, Ahmed Draia, Jun Duan, Marc Fiume, Dan Fornika, Eric Fournier, Erin Gill, Paul Gordon, Emma Griffiths, Jose Hector Galvez Lopez, Darian Hole, William Hsiao, Jeffrey Joy, Kimia Kamelian, Natalie Knox, Philip Mabon, Finlay Maguire, Tom Matthews, Andrew McArthur, Samir Mechai, Sandrine Moreira, Art Poon, Amos Raphenya, Claire Sevenhuysen, Jared Simpson, Jennifer Tanner, Lauren Tindale, John Tyson, Geoff Winsor, Nolan Woods

CanCOGeN Ethics and Governance Working Group
Yann Joly, Fiona Brinkman, Erin Gill, William Hsiao, Hanshi Liu, Sandrine Moreira, Gary Van Domselaar, Ma’n Zawati, Sarah Savić-Kallesøe

CanCOGeN Metadata Working Group
William Hsiao, David Alexander, Zohaib Anwar, Nathalie Bastien, Tim Booth, Guillaume Bourque, Fiona Brinkman, Hughes Charest, Caroline Colijn, Matthew Croxen, Guillaume Desnoyers, Rejean Dion, Damion Dooley, Ana Duggan, Leah Dupasquier, Kerry Dust, Eleni Galanis, Emma Garlock, Erin Gill, Gurinder Gopal, Tom Graefenhan, Morag Graham, Emma Griffiths, Linda Hoang, Naveed Janjua, Jeffrey Joy, Kimia Kamelian, Lev Kearney, Natalie Knox, Theodore Kuschak, Jason LeBlanc, Yan Li, Anna Majer, Adel Malek, Ryan McDonald, David Moore, Celine Nadon, Samir Patel, Natalie Prystajecky, Anoosha Sehar, Claire Sevenhuysen, Garrett Sorensen, Laura Steven, Lori Strudwick, Marsha Taylor, Shane Thiessen, Gary Van Domselaar, Adrian Zetner

CanCOGeN Research Collaborations Working Group
Fiona Brinkman, Zohaib Anwar, Marceline Côté, Marc Fiume, Laura Gilbert, Erin Gill, Paul Gordon, Yann Joly, Sandrine Moreira, Samira Mubareka, Natalie Prystajecky, Jennifer Tanner, Gary Van Domselaar, Phot Zahariadis,

CanCOGeN Sequencing Working Group
Ioannis Ragoussis, Terrance Snutch, Patryk Aftanas, Matthew Croxen, Hooman Derakhshani, Nahuel Fittipaldi, Morag Graham, Andrew McArthur, Sandrine Moreira, Samira Mubareka, Natalie Prystajecky, Ioannis Ragoussis, Jared Simpson, Michael Surette, John Tyson

CanCOGeN Quality Control Working Group
Jared Simpson, Mathieu Bourgey, Kodjovi Dodji Mlaga, Nahuel Fittipaldi, Jose Hector Galvez Lopez, Natalie Knox, Genevieve Labbe, Pierre Lyons, Philip Mabon, Finlay Maguire, Anna Majer, Andrew McArthur, Ryan McDonald, Sandrine Moreira, Natalie Prystajecky, Karthikeyan Sivaraman, Kerri Smith, Terrance Snutch, Karthikeyan Sivaraman Andrea Tyler, John Tyson, Gary Van Domselaar

Canadian VirusSeq Data Portal (CVDP) Team
Guillaume Bourque, Lincoln Stein, Christina Yung, Hanshi Liu, Yann Joly, Adrielle Houweling, William Hsiao, Marc Fiume, David Bujold, Erin Gill, Fiona Brinkman, Nithu John, Rosita Bajari, Linda Xiang, Alexandru Lepsa, Jaser Uddin, Justin Richardsson, Leonardo Rivera